1,209 research outputs found

    Dye laser remote sensing of marine plankton

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    Dye laser, emitting four wavelengths sequentially in time, has been incorporated into helicopter-borne lidar flight package, for performing studies of laser-induced fluorescence of chlorophyll A in algae. Data obtained by multicolor lidar technique can provide water-resource management with rapid-access wide-area coverage of the impact of various environmental factors for any body of water

    Visible absorbance spectra: A basis for in situ and passive remote sensing of phytoplankton concentration and community composition

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    The concentration and composition of phytoplankton populations are measured by an optical method which can be used either in situ or remotely. This method is based upon the in vivo light absorption characteristics of phytoplankton. To provide a data base for testing assumptions relative to the proposed method, visible absorbance spectra of pure cultures of 20 marine phytoplankton were obtained under laboratory conditions. Descriptive and analytical statistics were computed for the absorbance spectra and were used to make comparisons between members of major taxonomic groups and between groups. Spectral variation between the members of the major taxonomic groups was observed to be considerably less than the spectral variation between these groups. In several cases the differences between the mean absorbance spectra of major taxonomic groups are significant enough to be detected with passive remote sensing techniques

    Laboratory tank studies of a single species of phytoplankton using a remote sensing fluorosensor

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    Phytoplankton were grown in the laboratory for the purpose of testing a remote fluorosensor. The fluorosensor uses a unique four-wavelength dye laser system to excite phytoplankton bearing chlorophyll and to measure the chlorophyll fluorescence generated by this excitation. Six different species were tested, one at a time, and each was grown two to four times. Fluorescence measured by the fluorosensor provides good quantitative measurement of chlorophyll concentrations for all species tested while the cultures were in log phase growth. Fluorescene cross section ratios obtained in the single species tank tests support the hypothesis that the shape of the fluorescence cross section curve remains constant with the species (differences in fluorescence cross section ratios are a basis for determining composition of phytoplankton according to color group when a multiwavelength source of excitation is used. Linear relationships exist between extracted chlorophyll concentration and fluorescence measured by the remote fluorosensor during the log phase growth of phytoplankton cultures tested

    Analysis of ALOPE data from Superflux

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    Remote sensing data collected with the airborne lidar oceanographic probing experiment (ALOPE) laser fluorosensor during the Superflux 1 and Superflux 2 experiments were analyzed using two techniques. A qualitative technique which requires no supplementary data provided a near-real-time estimate of relative abundance of the golden-brown and green phytoplankton color groups. Contour plots developed for the later mission are used to demonstrate the utility of this technique. A quantitative technique which requires supplementary data to define the attenuation coefficient provides chlorophyll a concentration by color group. The sum of the golden-brown and green chlorophyll a data yields total chlorophyll a values which may be compared with in situ data. As expected, the golden-brown population was dominant in the Chesapeake Bay and the Bay plume whereas the green population was dominant in shelf waters

    Identification of novel subgroup a variants with enhanced receptor binding and replicative capacity in primary isolates of anaemogenic strains of feline leukaemia virus

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    <b>BACKGROUND:</b> The development of anaemia in feline leukaemia virus (FeLV)-infected cats is associated with the emergence of a novel viral subgroup, FeLV-C. FeLV-C arises from the subgroup that is transmitted, FeLV-A, through alterations in the amino acid sequence of the receptor binding domain (RBD) of the envelope glycoprotein that result in a shift in the receptor usage and the cell tropism of the virus. The factors that influence the transition from subgroup A to subgroup C remain unclear, one possibility is that a selective pressure in the host drives the acquisition of mutations in the RBD, creating A/C intermediates with enhanced abilities to interact with the FeLV-C receptor, FLVCR. In order to understand further the emergence of FeLV-C in the infected cat, we examined primary isolates of FeLV-C for evidence of FeLV-A variants that bore mutations consistent with a gradual evolution from FeLV-A to FeLV-C.<p></p> <b>RESULTS:</b> Within each isolate of FeLV-C, we identified variants that were ostensibly subgroup A by nucleic acid sequence comparisons, but which bore mutations in the RBD. One such mutation, N91D, was present in multiple isolates and when engineered into a molecular clone of the prototypic FeLV-A (Glasgow-1), enhanced replication was noted in feline cells. Expression of the N91D Env on murine leukaemia virus (MLV) pseudotypes enhanced viral entry mediated by the FeLV-A receptor THTR1 while soluble FeLV-A Env bearing the N91D mutation bound more efficiently to mouse or guinea pig cells bearing the FeLV-A and -C receptors. Long-term in vitro culture of variants bearing the N91D substitution in the presence of anti-FeLV gp70 antibodies did not result in the emergence of FeLV-C variants, suggesting that additional selective pressures in the infected cat may drive the subsequent evolution from subgroup A to subgroup C.<p></p> <b>CONCLUSIONS:</b> Our data support a model in which variants of FeLV-A, bearing subtle differences in the RBD of Env, may be predisposed towards enhanced replication in vivo and subsequent conversion to FeLV-C. The selection pressures in vivo that drive the emergence of FeLV-C in a proportion of infected cats remain to be established

    Evolution of replication efficiency following infection with a molecularly cloned feline immunodeficiency virus of low virulence

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    The development of an effective vaccine against human immunodeficiency virus is considered to be the most practicable means of controlling the advancing global AIDS epidemic. Studies with the domestic cat have demonstrated that vaccinal immunity to infection can be induced against feline immunodeficiency virus (FIV); however, protection is largely restricted to laboratory strains of FIV and does not extend to primary strains of the virus. We compared the pathogenicity of two prototypic vaccine challenge strains of FIV derived from molecular clones; the laboratory strain PET<sub>F14</sub> and the primary strain GL8<sub>414</sub>. PET<sub>F14</sub> established a low viral load and had no effect on CD4<sup>+</sup>- or CD8<sup>+</sup>- lymphocyte subsets. In contrast, GL8<sub>414</sub> established a high viral load and induced a significant reduction in the ratio of CD4<sup>+</sup> to CD8<sup>+</sup> lymphocytes by 15 weeks postinfection, suggesting that PET<sub>F14</sub> may be a low-virulence-challenge virus. However, during long-term monitoring of the PET<sub>F14</sub>-infected cats, we observed the emergence of variant viruses in two of three cats. Concomitant with the appearance of the variant viruses, designated 627<sub>W135</sub> and 628<sub>W135</sub>, we observed an expansion of CD8<sup>+</sup>-lymphocyte subpopulations expressing reduced CD8 ß-chain, a phenotype consistent with activation. The variant viruses both carried mutations that reduced the net charge of the V3 loop (K409Q and K409E), giving rise to a reduced ability of the Env proteins to both induce fusion and to establish productive infection in CXCR4-expressing cells. Further, following subsequent challenge of naïve cats with the mutant viruses, the viruses established higher viral loads and induced more marked alterations in CD8<sup>+</sup>-lymphocyte subpopulations than did the parent F14 strain of virus, suggesting that the E409K mutation in the PET<sub>F14</sub> strain contributes to the attenuation of the virus

    Catalog of Isolated Galaxies Selected from the 2MASS Survey

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    We search for isolated galaxies based on the automatic identification of isolated sources from the Two Micron All-Sky Survey (2MASS) followed by a visual inspection of their surroundings. We use the modified Karachentseva criterion to compile a catalog of 3227 isolated galaxies (2MIG), which contains 6% of 2MASS Extended Sources Catalog (or 2MASX) sources brighter than Ks = 12 mag with angular diameters a_K > 30 arcsec. The catalog covers the entire sky and has an effective depth of z = 0.02. The 2493 very isolated objects of the catalog, which we include into the 2MVIG catalog, can be used as a reference sample to investigate the effects of the environment on the structure and evolution of galaxies located in regions with extremely low density of matter.Comment: 19 pages, 13 figure

    Global anisotropy of arrival directions of ultra-high-energy cosmic rays: capabilities of space-based detectors

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    Planned space-based ultra-high-energy cosmic-ray detectors (TUS, JEM-EUSO and S-EUSO) are best suited for searches of global anisotropies in the distribution of arrival directions of cosmic-ray particles because they will be able to observe the full sky with a single instrument. We calculate quantitatively the strength of anisotropies associated with two models of the origin of the highest-energy particles: the extragalactic model (sources follow the distribution of galaxies in the Universe) and the superheavy dark-matter model (sources follow the distribution of dark matter in the Galactic halo). Based on the expected exposure of the experiments, we estimate the optimal strategy for efficient search of these effects.Comment: 19 pages, 7 figures, iopart style. v.2: discussion of the effect of the cosmic magnetic fields added; other minor changes. Simulated UHECR skymaps available at http://livni.inr.ac.ru/UHECRskymaps

    Contact Line Instability and Pattern Selection in Thermally Driven Liquid Films

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    Liquids spreading over a solid substrate under the action of various forces are known to exhibit a long wavelength contact line instability. We use an example of thermally driven spreading on a horizontal surface to study how the stability of the flow can be altered, or patterns selected, using feedback control. We show that thermal perturbations of certain spatial structure imposed behind the contact line and proportional to the deviation of the contact line from its mean position can completely suppress the instability. Due to the presence of mean flow and a spatially nonuniform nature of spreading liquid films the dynamics of disturbances is governed by a nonnormal evolution operator, opening up a possibility of transient amplification and nonlinear instabilities. We show that in the case of thermal driving the nonnormality can be significant, especially for small wavenumber disturbances, and trace the origin of transient amplification to a close alignment of a large group of eigenfunctions of the evolution operator. However, for values of noise likely to occur in experiments we find that the transient amplification is not sufficiently strong to either change the predictions of the linear stability analysis or invalidate the proposed control approach.Comment: 13 pages, 14 figure
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